Paketti: r-bioc-rtracklayer (1.62.0-1) [debports]

Links for r-bioc-rtracklayer

Debian-palvelut:

Vikailmoitukset

Imuroi lähdekoodipaketti :

Ei löytynyt

Ylläpitäjät:

External Resources:

Kotisivu [bioconductor.org]

Samankaltaisia paketteja:

GNU R interface to genome browsers and their annotation tracks

Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.

Muut pakettiin r-bioc-rtracklayer liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: r-api-4.0

näennäispaketti, jonka toteuttaa r-base-core
dep: r-api-bioc-3.18

näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
dep: r-bioc-biocgenerics (>= 0.35.3)

generic functions for Bioconductor
dep: r-bioc-biocio

standard input and output for Bioconductor packages
dep: r-bioc-biostrings (>= 2.47.6)

GNU R string objects representing biological sequences
dep: r-bioc-genomeinfodb (>= 1.15.2)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-genomicalignments (>= 1.15.6)

BioConductor representation and manipulation of short genomic alignments
dep: r-bioc-genomicranges (>= 1.37.2)

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-iranges (>= 2.13.13)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rsamtools (>= 1.31.2)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
dep: r-bioc-s4vectors (>= 0.23.18)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-xvector (>= 0.19.7)

BioConductor representation and manpulation of external sequences
dep: r-bioc-zlibbioc

(Virtual) zlibbioc Bioconductor package
dep: r-cran-rcurl (>= 1.4-2)

GNU R General network (HTTP/FTP/...) client interface
dep: r-cran-restfulr (>= 0.0.13)

GNU R interface to RESTful web wervices
dep: r-cran-xml (>= 1.98-0)

GNU R package for XML parsing and generation
dep: zlib1g (>= 1:1.1.4)

pakkauskirjaston ajonaikaistiedostot

sug: r-bioc-bsgenome (>= 1.33.4)

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-genefilter

methods for filtering genes from microarray experiments
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-limma

linear models for microarray data
sug: r-bioc-org.hs.eg.db

genome-wide annotation for Human
sug: r-cran-runit

GNU R package providing unit testing framework

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