Paketti: libsnpsift-java (5.1+dfsg2-2)

Links for libsnpsift-java

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Imuroi lähdekoodipaketti snpsift:

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Kotisivu [pcingola.github.io]

Samankaltaisia paketteja:

tool to annotate and manipulate genome variants - lib

SnpSift is a toolbox that allows one to filter and manipulate annotated files. Once the genomic variants have been annotated, one needs to filter them out in order to find the "interesting / relevant variants". Given the large data files, this is not a trivial task (e.g. one cannot load all the variants into XLS spreadsheet). SnpSift helps to perform this VCF file manipulation and filtering required at this stage in data processing pipelines.

This package contains the library.

Muut pakettiin libsnpsift-java liittyvät paketit

depends

recommends

suggests

enhances

dep: antlr4

ANTLR Parser Generator
dep: libcommons-math3-java (>= 3.6.1)

Java lightweight mathematics and statistics components
dep: libhtsjdk-java (>= 2.23.0)

Java API for high-throughput sequencing data (HTS) formats
dep: libsnpeff-java

genetic variant annotation and effect prediction toolbox - lib
dep: libtrove3-java

high performance collections for java

Imuroi libsnpsift-java

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