Paketti: qcumber (2.3.0-2)

Links for qcumber

Debian-palvelut:

Imuroi lähdekoodipaketti qcumber:

Ylläpitäjät:

External Resources:

Kotisivu [gitlab.com]

Samankaltaisia paketteja:

quality control of genomic sequences

QCPipeline is a tool for quality control. The workflow is as follows:

 1. Quality control with FastQC
 2. Trim Reads with Trimmomatic
 3. Quality control of trimmed reads with FastQC
 4. Map reads against reference using bowtie2
 5. Classify reads with Kraken

Muut pakettiin qcumber liittyvät paketit

depends

recommends

suggests

enhances

dep: debconf (>= 0.5)

Debianin kokoonpanonhallintajärjestelmä

tai debconf-2.0

näennäispaketti, jonka toteuttaa cdebconf, cdebconf-udeb, debconf
dep: libjs-angularjs

lets you write client-side web applications as if you had a smarter browser
dep: libjs-bootstrap

HTML, CSS and JS framework
dep: libjs-d3

JavaScript visualization library for HTML and SVG
dep: libjs-jquery

JavaScript library for dynamic web applications
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-biopython

Python3 library for bioinformatics
dep: python3-jinja2

small but fast and easy to use stand-alone template engine
dep: python3-matplotlib

Python based plotting system in a style similar to Matlab (Python 3)
dep: r-base-core

GNU R core of statistical computation and graphics system
dep: r-bioc-savr

GNU R parse and analyze Illumina SAV files
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-quantreg

GNU R package for quantile regression
dep: snakemake

pythonic workflow management system

Imuroi qcumber

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	49.3 kt	236.0 kt	[tiedostoluettelo]