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[ Source: ncbi-blast+ ]

Paketti: ncbi-blast+ (2.12.0+ds-3 ja muut)

Links for ncbi-blast+

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Imuroi lähdekoodipaketti ncbi-blast+:

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External Resources:

Kotisivu [www.ncbi.nlm.nih.gov]

Samankaltaisia paketteja:

next generation suite of BLAST sequence search tools

The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Purpose: use::analysing, works-with::biological-sequence

Muut pakettiin ncbi-blast+ liittyvät paketit

depends

recommends

suggests

enhances

dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.33)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 4.2)

GCC:n apukirjasto
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: liblmdb0 (>= 0.9.7)

Lightning Memory-Mapped Database shared library
dep: libmbedcrypto7 (>= 2.28.0)

lightweight crypto and SSL/TLS library - crypto library
dep: libmbedtls14 (>= 2.28.0)

lightweight crypto and SSL/TLS library - tls library
dep: libpcre3

Old Perl 5 Compatible Regular Expression Library - runtime files
dep: libstdc++6 (>= 11)

GNU standardi C++ -kirjasto, versio 3
dep: ncbi-data

Platform-independent data for the NCBI toolkit
dep: perl

Larry Wallin kieli tekstitiedostojen analysointia ja raportointia varten
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.2.11.dfsg)

pakkauskirjaston ajonaikaistiedostot

enh: t-coffee

Multiple Sequence Alignment

Imuroi ncbi-blast+

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
mipsel	2.12.0+ds-3+b1	8,748.4 kt	55,228.0 kt	[tiedostoluettelo]