Paketti: r-bioc-oligo (1.62.2+ds-1)

Links for r-bioc-oligo

Debian-palvelut:

Imuroi lähdekoodipaketti r-bioc-oligo:

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External Resources:

Kotisivu [bioconductor.org]

Samankaltaisia paketteja:

Preprocessing tools for oligonucleotide arrays

A package to analyze oligonucleotide arrays (expression/SNP/tiling/exon) at probe-level. It currently supports Affymetrix (CEL files) and NimbleGen arrays (XYS files).

Muut pakettiin r-bioc-oligo liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.29)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: r-api-4.0

näennäispaketti, jonka toteuttaa r-base-core
dep: r-api-bioc-3.16

näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-2)

GNU R core of statistical computation and graphics system
dep: r-bioc-affxparser (>= 1.39.4)

Affymetrix File Parsing SDK
dep: r-bioc-affyio (>= 1.35.0)

BioConductor tools for parsing Affymetrix data files
dep: r-bioc-biobase (>= 2.27.3)

base functions for Bioconductor
dep: r-bioc-biocgenerics (>= 0.13.11)

generic functions for Bioconductor
dep: r-bioc-biostrings (>= 2.35.12)

GNU R string objects representing biological sequences
dep: r-bioc-oligoclasses (>= 1.29.6)

Classes for high-throughput arrays supported by oligo and crlmm
dep: r-bioc-preprocesscore (>= 1.29.0)

BioConductor collection of pre-processing functions
dep: r-bioc-zlibbioc

(Virtual) zlibbioc Bioconductor package
dep: r-cran-dbi (>= 0.3.1)

GNU R package providing a generic database interface
dep: r-cran-ff

Memory-Efficient Fast-Access Storage of Large Data
dep: r-cran-rsqlite (>= 1.0.0)

Database Interface R driver for SQLite
dep: zlib1g (>= 1:1.1.4)

pakkauskirjaston ajonaikaistiedostot

sug: r-bioc-annotationdbi

GNU R Annotation Database Interface for BioConductor
sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-biomart

GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
sug: r-bioc-genefilter

methods for filtering genes from microarray experiments
sug: r-bioc-limma

linear models for microarray data
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-rcolorbrewer

GNU R package providing suitable color palettes
sug: r-cran-rcurl

GNU R General network (HTTP/FTP/...) client interface
sug: r-cran-runit

GNU R package providing unit testing framework

Imuroi r-bioc-oligo

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Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
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