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[ Source: megadepth  ]

Package: megadepth (1.2.0-4 and others)

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computes coverage from BigWig and BAM sequencing files

A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.

This package is a successor of the program 'bamcount'.

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Architecture Version Package Size Installed Size Files
amd64 1.2.0-4+b1 81.0 kB275.0 kB [list of files]