Package: tombo (1.5.1-4) [debports]

Links for tombo

Debian Resources:

Bug Reports

Download Source Package :

Not found

Maintainers:

External Resources:

Homepage [github.com]

Similar packages:

identification of modified nucleotides from raw nanopore sequencing data

Tombo is a suite of tools primarily for the identification of modified nucleotides from nanopore sequencing data. Tombo also provides tools for the analysis and visualization of raw nanopore signal.

Other Packages Related to tombo

depends

recommends

suggests

enhances

dep: cython3

C-Extensions for Python 3
dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (<< 3.11)

dep: python3 (>= 3.10~)
dep: python3-h5py

general-purpose Python interface to hdf5
dep: python3-h5py-serial

general-purpose Python interface to hdf5 (Python 3 serial)
dep: python3-mappy

Python3 interface minimap2
dep: python3-numpy

Fast array facility to the Python language (Python 3)
dep: python3-pkg-resources

Package Discovery and Resource Access using pkg_resources
dep: python3-scipy

scientific tools for Python 3
dep: python3-tqdm

fast, extensible progress bar for Python 3 and CLI tool

rec: python3-pyfaidx

efficient random access to fasta subsequences for Python 3
rec: python3-rpy2

Python3 interface to the GNU R language and environment (version 2)

Download tombo

Download for all available architectures
Architecture	Package Size	Installed Size	Files
x32 (unofficial port)	419.8 kB	1,390.0 kB	[list of files]