Package: i2masschroq (0.4.54-1) [debports]

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Homepage [pappso.inra.fr]

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Successor of X!TandemPipeline

The program allows one to perform the following tasks:

 -Reads X!Tandem xml results files
 -Reads MASCOT dat results files
 -Reads TPP pepXML results files
 -Reads PSI mzIdentML results files
 -Run X!Tandem analyzes through a graphical user interface
 -Implements various filters based on statistical values
 -Powerful original grouping algorithm to filter redundancy
 -Phosphopeptide mode to handle phosphoproteomics datasets
 -Edit, search and sort the data graphically
 -XIC chromatogram browser (eXtracted Ion Current)
 -Comparisons of theoretical isotope patterns to measured MS1 XIC areas
 -Export data directly to Microsoft Office 2010 and LibreOffice (ods export)
 -Handle huge datasets very quickly
 -Perform peptide quantification through MassChroQml export

Other Packages Related to i2masschroq

depends

recommends

suggests

enhances

dep: libc6 (>= 2.32)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libgcc-s1 (>= 3.4)

GCC support library
dep: libgrantlee-templates5 (>= 5.0.0)

Grantlee templating library for Qt - Templates
dep: libodsstream0

C++ library to read or write ODS files
dep: libpappsomspp-widget0

C++ library to handle mass spectrometry data (GUI runtime)
dep: libpappsomspp0

C++ library to handle mass spectrometry data (non-GUI runtime)
dep: libqcustomplot2.0 (>= 2.0.1+dfsg1)

Qt C++ widget for plotting
dep: libqt5concurrent5 (>= 5.0.2)

Qt 5 concurrent module
dep: libqt5core5a (>= 5.15.1)

Qt 5 core module
dep: libqt5gui5 (>= 5.8.0)

Qt 5 GUI module

or libqt5gui5-gles (>= 5.8.0)

Qt 5 GUI module — OpenGL ES variant
dep: libqt5network5 (>= 5.14.1)

Qt 5 network module
dep: libqt5printsupport5 (>= 5.0.2)

Qt 5 print support module
dep: libqt5sql5 (>= 5.0.2)

Qt 5 SQL module
dep: libqt5svg5 (>= 5.6.0~beta)

Qt 5 SVG module
dep: libqt5widgets5 (>= 5.15.1)

Qt 5 widgets module
dep: libqt5xml5 (>= 5.1.0)

Qt 5 XML module
dep: librdata0

Read and write R data frames from C (runtime files)
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: tandem-mass

mass spectrometry software for protein identification
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

rec: i2masschroq-tools

X!Tandem-related utilities for timsTOF pro and modern mzML data

Download i2masschroq

Download for all available architectures
Architecture	Package Size	Installed Size	Files
sparc64 (unofficial port)	956.6 kB	4,496.0 kB	[list of files]