[ Source: allelecount ]
Package: allelecount (4.3.0-3 and others)
Links for allelecount
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Download Source Package allelecount:
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External Resources:
- Homepage [github.com]
Similar packages:
NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings).
The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg.
Other Packages Related to allelecount
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- dep: libc6 (>= 2.34) [not alpha, ia64, loong64, sh4]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.40) [loong64, sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
Download allelecount
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 4.3.0-3 | 28.9 kB | 120.0 kB | [list of files] |
| amd64 | 4.3.0-3 | 29.5 kB | 92.0 kB | [list of files] |
| arm64 | 4.3.0-3 | 28.6 kB | 120.0 kB | [list of files] |
| armel | 4.3.0-3 | 29.0 kB | 87.0 kB | [list of files] |
| armhf | 4.3.0-3 | 27.9 kB | 79.0 kB | [list of files] |
| hppa (unofficial port) | 4.3.0-3 | 28.3 kB | 84.0 kB | [list of files] |
| i386 | 4.3.0-3 | 29.9 kB | 95.0 kB | [list of files] |
| ia64 (unofficial port) | 4.3.0-2+b1 | 32.1 kB | 111.0 kB | [list of files] |
| loong64 (unofficial port) | 4.3.0-3 | 28.8 kB | 88.0 kB | [list of files] |
| m68k (unofficial port) | 4.3.0-3 | 27.6 kB | 87.0 kB | [list of files] |
| mips64el | 4.3.0-3 | 28.6 kB | 122.0 kB | [list of files] |
| ppc64 (unofficial port) | 4.3.0-3 | 30.2 kB | 120.0 kB | [list of files] |
| ppc64el | 4.3.0-3 | 30.7 kB | 120.0 kB | [list of files] |
| riscv64 | 4.3.0-3 | 28.9 kB | 84.0 kB | [list of files] |
| s390x | 4.3.0-3 | 29.0 kB | 92.0 kB | [list of files] |
| sh4 (unofficial port) | 4.3.0-3 | 29.7 kB | 119.0 kB | [list of files] |
| sparc64 (unofficial port) | 4.3.0-3 | 27.6 kB | 1,082.0 kB | [list of files] |
| x32 (unofficial port) | 4.3.0-3 | 29.5 kB | 91.0 kB | [list of files] |