Paket: libbifrost0 (1.3.1-1)
Links für libbifrost0
Debian-Ressourcen:
Quellcode-Paket bifrost herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
library for parallel construction, indexing and querying of de Bruijn graphs
Libbifrost is the shared library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.
* Build, index, color and query the compacted de Bruijn graph * No need to build the uncompacted de Bruijn graph * Reads or assembled genomes as input * Output graph in GFA (can be visualized with Bandage), FASTA or binary * Graph cleaning: short tip clipping, etc. * Multi-threaded * No parameters to estimate with other tools * Exact or approximate k-mer search of queries
Andere Pakete mit Bezug zu libbifrost0
|
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
-
- dep: libgcc-s1 (>= 3.0) [nicht amd64, mips64el]
- GCC Support-Bibliothek
- dep: libgcc-s1 (>= 3.4) [amd64, mips64el]
-
- dep: libstdc++6 (>= 13.1)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
-
- dep: zlib1g (>= 1:1.1.4)
- Kompressions-Bibliothek - Laufzeit
libbifrost0 herunterladen
Architektur | Paketgröße | Größe (installiert) | Dateien |
---|---|---|---|
amd64 | 417,9 kB | 1.436,0 kB | [Liste der Dateien] |
arm64 | 369,5 kB | 1.324,0 kB | [Liste der Dateien] |
mips64el | 350,8 kB | 1.504,0 kB | [Liste der Dateien] |
ppc64el | 435,0 kB | 1.644,0 kB | [Liste der Dateien] |
s390x | 430,1 kB | 1.524,0 kB | [Liste der Dateien] |