[ Quellcode: sga ]
Paket: sga (0.10.15-7 und andere)
Links für sga
Debian-Ressourcen:
Quellcode-Paket sga herunterladen:
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Michael R. Crusoe (QS-Seite)
- Andreas Tille (QS-Seite)
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
de novo genome assembler that uses string graphs
The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.
SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers' string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.
Andere Pakete mit Bezug zu sga
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-ruffus
- Python3 computation pipeline library widely used in bioinformatics
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- dep: zlib1g (>= 1:1.1.4)
- Kompressions-Bibliothek - Laufzeit
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- rec: abyss
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sga herunterladen
| Architektur | Version | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|---|
| mips64el | 0.10.15-7+b1 | 745,3 kB | 3.062,0 kB | [Liste der Dateien] |