[ Quellcode: provean ]
Paket: provean (1.1.5+ds-5)
Links für provean
Debian-Ressourcen:
Quellcode-Paket provean herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [provean.jcvi.org]
Ähnliche Pakete:
Protein Variation Effect Analyzer
PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein.
PROVEAN is useful for filtering sequence variants to identify nonsynonymous or indel variants that are predicted to be functionally important.
The performance of PROVEAN is comparable to popular tools such as SIFT or PolyPhen-2.
A fast computation approach to obtain pairwise sequence alignment scores enabled the generation of precomputed PROVEAN predictions for 20 single AA substitutions and a single AA deletion at every amino acid position of all protein sequences in human and mouse.
Andere Pakete mit Bezug zu provean
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- dep: cd-hit
- Programme zur schnellen Gruppierung von Sequenzen
-
- dep: libc6 (>= 2.38)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [nicht armhf, riscv64]
- GCC Support-Bibliothek
- dep: libgcc-s1 (>= 3.4) [riscv64]
- dep: libgcc-s1 (>= 3.5) [armhf]
-
- dep: libstdc++6 (>= 13.1)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
-
- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
provean herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 51,1 kB | 149,0 kB | [Liste der Dateien] |
| arm64 | 44,8 kB | 153,0 kB | [Liste der Dateien] |
| armhf | 47,4 kB | 152,0 kB | [Liste der Dateien] |
| i386 | 52,3 kB | 144,0 kB | [Liste der Dateien] |
| ppc64el | 49,2 kB | 153,0 kB | [Liste der Dateien] |
| riscv64 | 48,1 kB | 113,0 kB | [Liste der Dateien] |
| s390x | 50,4 kB | 141,0 kB | [Liste der Dateien] |