[ Quellcode: r-bioc-genomicalignments ]
Paket: r-bioc-genomicalignments (1.26.0-1)
Links für r-bioc-genomicalignments
Debian-Ressourcen:
Quellcode-Paket r-bioc-genomicalignments herunterladen:
- [r-bioc-genomicalignments_1.26.0-1.dsc]
- [r-bioc-genomicalignments_1.26.0.orig.tar.gz]
- [r-bioc-genomicalignments_1.26.0-1.debian.tar.xz]
Betreuer:
Externe Ressourcen:
- Homepage [bioconductor.org]
Ähnliche Pakete:
BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
Andere Pakete mit Bezug zu r-bioc-genomicalignments
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- dep: libc6 (>= 2.4)
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auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: r-api-4.0
- virtuelles Paket, bereitgestellt durch r-base-core
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- dep: r-api-bioc-3.12
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- dep: r-base-core (>= 4.0.3-1)
- GNU R - System für statistische Berechnungen und Grafik - Kern
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- dep: r-bioc-biocgenerics (>= 0.15.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
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-
- dep: r-bioc-biostrings (>= 2.55.7)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.13.1)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicranges (>= 1.41.5)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.23.9)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.27.12)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment (>= 1.9.13)
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- rec: r-bioc-shortread (>= 1.24.0)
- GNU R classes and methods for high-throughput short-read sequencing data
-
- rec: r-cran-runit
- GNU-R-Paket, das ein Programmiergerüst für Komponententests bereitstellt
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
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- R package for RNA-Seq Differential Expression Analysis
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- Empirische Analyse von digitalen Genexpressionsdaten mit R
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- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
r-bioc-genomicalignments herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| mips64el | 2.140,7 kB | 2.993,0 kB | [Liste der Dateien] |