Paket: megan-ce (6.21.1+dfsg-2)

Links für megan-ce

Debian-Ressourcen:

Quellcode-Paket megan-ce herunterladen:

Betreuer:

Externe Ressourcen:

Homepage [github.com]

interactive tool to explore and analyse microbiome sequencing data

MEGAN Community Edition is a shotgun sequencer to analyze microbiome samples. It is a rewrite and extension of the widely-used microbiome analysis tool MEGAN so as to facilitate the interactive analysis of the taxonomic and functional content of very large microbiome datasets. Other new features include a functional classifier called InterPro2GO, gene-centric read assembly, principal coordinate analysis of taxonomy and function, and support for metadata. By integrating MEGAN CE with the high-throughput DNA-to-protein alignment tool DIAMOND a powerful and complete pipeline for the analysis of metagenome shotgun sequences can be provided.

Andere Pakete mit Bezug zu megan-ce

hängt ab von

empfiehlt

schlägt vor

erweitert

dep: default-jre

Standard Java or Java compatible Runtime
dep: libcolt-free-java

scalable scientific and technical computing in Java
dep: libcommons-math3-java

Java lightweight mathematics and statistics components
dep: libgoogle-gson-java

Converts Java objects into their JSON representation
dep: libjama-java

Basic linear algebra library for Java
dep: libjbcrypt-java

Java implementation of OpenBSD's Blowfish hashing
dep: libjloda-java

Java library of data structures and algorithms for bioinformatics
dep: libopenjfx-java

JavaFX/OpenJFX - Rich client application platform for Java (Java libraries)
dep: libsis-jhdf5-java

easy-to-use HDF library for Java
dep: libxerial-sqlite-jdbc-java

Xerial's SQLite JDBC Driver

megan-ce herunterladen

Download für alle verfügbaren Architekturen
Architektur	Paketgröße	Größe (installiert)	Dateien
all	36.188,2 kB	37.717,0 kB	[Liste der Dateien]