Paket: libseqlib2 (1.2.0+dfsg-9)
Links für libseqlib2
Debian-Ressourcen:
Quellcode-Paket libseqlib herunterladen:
- [libseqlib_1.2.0+dfsg-9.dsc]
- [libseqlib_1.2.0+dfsg.orig.tar.xz]
- [libseqlib_1.2.0+dfsg-9.debian.tar.xz]
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Andreas Tille (QS-Seite)
- Étienne Mollier (QS-Seite)
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
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libseqlib2 herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 158,0 kB | 553,0 kB | [Liste der Dateien] |
| arm64 | 137,6 kB | 468,0 kB | [Liste der Dateien] |
| armel | 127,8 kB | 467,0 kB | [Liste der Dateien] |
| armhf | 132,5 kB | 339,0 kB | [Liste der Dateien] |
| i386 | 165,4 kB | 499,0 kB | [Liste der Dateien] |
| mips64el | 138,7 kB | 557,0 kB | [Liste der Dateien] |
| mipsel | 139,6 kB | 551,0 kB | [Liste der Dateien] |
| ppc64el | 162,4 kB | 597,0 kB | [Liste der Dateien] |
| s390x | 135,7 kB | 496,0 kB | [Liste der Dateien] |