[ Quellcode: r-bioc-dexseq ]
Paket: r-bioc-dexseq (1.44.0+dfsg-1)
Links für r-bioc-dexseq
Debian-Ressourcen:
Quellcode-Paket r-bioc-dexseq herunterladen:
- [r-bioc-dexseq_1.44.0+dfsg-1.dsc]
- [r-bioc-dexseq_1.44.0+dfsg.orig.tar.xz]
- [r-bioc-dexseq_1.44.0+dfsg-1.debian.tar.xz]
Betreuer:
Externe Ressourcen:
- Homepage [bioconductor.org]
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GNU R inference of differential exon usage in RNA-Seq
The package is focused on finding differential exon usage using RNA-seq exon counts between samples with different experimental designs. It provides functions that allows the user to make the necessary statistical tests based on a model that uses the negative binomial distribution to estimate the variance between biological replicates and generalized linear models for testing. The package also provides functions for the visualization and exploration of the results.
Andere Pakete mit Bezug zu r-bioc-dexseq
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- dep: r-api-4.0
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- dep: r-api-bioc-3.16
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- dep: r-base-core (>= 4.2.2.20221110-1)
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- dep: r-bioc-biobase
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- dep: r-bioc-biocgenerics
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- dep: r-bioc-biocparallel
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- dep: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
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- dep: r-bioc-deseq2 (>= 1.9.11)
- R package for RNA-Seq Differential Expression Analysis
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- dep: r-bioc-genefilter
- methods for filtering genes from microarray experiments
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- dep: r-bioc-geneplotter
- R package of functions for plotting genomic data
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- dep: r-bioc-genomicranges (>= 1.23.7)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.5.17)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rsamtools
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- dep: r-bioc-s4vectors (>= 0.23.18)
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- dep: r-bioc-summarizedexperiment
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- dep: r-cran-hwriter
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- dep: r-cran-rcolorbrewer
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- dep: r-cran-statmod
- GNU R package providing algorithms and functions for statistical modeling
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- dep: r-cran-stringr
- Erleichtert die Arbeit mit Strings
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-genomicfeatures (>= 1.13.29)
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-cran-knitr
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- sug: r-cran-rmarkdown
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- sug: r-cran-testthat
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r-bioc-dexseq herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 444,1 kB | 675,0 kB | [Liste der Dateien] |