[ Quellcode: libvcflib ]
Paket: libvcflib-tools (1.0.3+dfsg-2)
Links für libvcflib-tools
Debian-Ressourcen:
Quellcode-Paket libvcflib herunterladen:
- [libvcflib_1.0.3+dfsg-2.dsc]
- [libvcflib_1.0.3+dfsg.orig.tar.xz]
- [libvcflib_1.0.3+dfsg-2.debian.tar.xz]
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
C++ library for parsing and manipulating VCF files (tools)
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.
vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:
* an API for parsing and operating on records of genomic variation as it can be described by the VCF format, * and a collection of command-line utilities for executing complex manipulations on VCF files.
This package contains several tools using the library.
Andere Pakete mit Bezug zu libvcflib-tools
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- dep: libc6 (>= 2.34)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libdisorder0 (>= 0.0.2)
- library for entropy measurement of byte streams
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- dep: libfastahack0 (>= 0.0+git20160702.bbc645f)
- library for indexing and sequence extraction from FASTA files (lib)
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- dep: libgcc-s1 (>= 3.0)
- GCC Support-Bibliothek
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- dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
- determine similar regions between two strings or genomic sequences (lib)
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- dep: libstdc++6 (>= 11)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
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- dep: libtabixpp0 (>= 1.0.0)
- C++ wrapper to tabix indexer
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- dep: libvcflib1 (>= 1.0.3+dfsg)
- C++ library for parsing and manipulating VCF files
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: r-base-core
- GNU R - System für statistische Berechnungen und Grafik - Kern
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- dep: r-cran-ggplot2
- Implementierung der »Grammar of Graphics«
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- dep: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- dep: r-cran-plyr
- tools for splitting, applying and combining data
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- sug: r-cran-pracma
- practical numerical math functions for GNU R
libvcflib-tools herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 730,3 kB | 4.880,0 kB | [Liste der Dateien] |