Package: iva (1.0.9+ds-11)

Links for iva

Debian Resources:

Download Source Package iva:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Andreas Tille (QA Page)
Jorge Soares (QA Page)
Sascha Steinbiss (QA Page)

External Resources:

Homepage [github.com]

Similar packages:

iterative virus sequence assembler

IVA is a de novo assembler designed to assemble virus genomes that have no repeat sequences, using Illumina read pairs sequenced from mixed populations at extremely high depth.

IVA's main algorithm works by iteratively extending contigs using aligned read pairs. Its input can be just read pairs, or additionally you can provide an existing set of contigs to be extended. Alternatively, it can take reads together with a reference sequence.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::python, User Interface: Command Line, Role: role::program, works-with::biological-sequence, Works with: Files

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Download iva

Download for all available architectures
Architecture	Package Size	Installed Size	Files
amd64	8,377.6 kB	8,765.0 kB	[list of files]
arm64	8,377.6 kB	8,765.0 kB	[list of files]
armel	8,377.6 kB	8,765.0 kB	[list of files]
armhf	8,377.6 kB	8,765.0 kB	[list of files]
i386	8,377.6 kB	8,765.0 kB	[list of files]
mips64el	8,377.6 kB	8,765.0 kB	[list of files]
mipsel	8,377.6 kB	8,765.0 kB	[list of files]
ppc64el	8,377.6 kB	8,765.0 kB	[list of files]