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[ Source: daligner  ]

Package: daligner (1.0+git20200727.ed40ce5-3)

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local alignment discovery between long nucleotide sequencing reads

These tools permit one to find all significant local alignments between reads encoded in a Dazzler database. The assumption is that the reads are from a Pacific Biosciences RS II long read sequencer. That is, the reads are long and noisy, up to 15% on average.

Tags: Implemented in: C, User Interface: Command Line, Role: Program

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Architecture Package Size Installed Size Files
amd64 200.3 kB1,508.0 kB [list of files]
arm64 173.8 kB1,408.0 kB [list of files]
armel 168.3 kB1,436.0 kB [list of files]
armhf 170.4 kB1,024.0 kB [list of files]
i386 192.0 kB1,696.0 kB [list of files]
mips64el 167.0 kB1,575.0 kB [list of files]
mipsel 174.3 kB1,632.0 kB [list of files]
ppc64el 198.3 kB2,188.0 kB [list of files]
s390x 188.9 kB1,572.0 kB [list of files]