Package: spoa (4.0.7+ds-1 and others)

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SIMD partial order alignment tool

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

Other Packages Related to spoa

depends

recommends

suggests

enhances

dep: libc6 (>= 2.4)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libspoa7.0.0 (>= 4.0.7+ds)

SIMD partial order alignment library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

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Architecture	Version	Package Size	Installed Size	Files
mipsel	4.0.7+ds-1+b1	36.3 kB	80.0 kB	[list of files]