Package: r-bioc-scrnaseq (2.4.0+ds-3)

Links for r-bioc-scrnaseq

Gene-level counts for a collection of public scRNA-seq datasets, provided as SingleCellExperiment objects with cell- and gene-level metadata.

dep: r-api-4.0

virtual package provided by r-base-core
dep: r-api-bioc-3.12

virtual package provided by r-bioc-biocgenerics
dep: r-base-core (>= 4.0.3-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-annotationdbi

GNU R Annotation Database Interface for BioConductor
dep: r-bioc-annotationhub

GNU R client to access AnnotationHub resources
dep: r-bioc-biocgenerics

generic functions for Bioconductor
dep: r-bioc-ensembldb

GNU R utilities to create and use an Ensembl based annotation database
dep: r-bioc-experimenthub

BioConductor client to access ExperimentHub resources
dep: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
dep: r-bioc-genomicranges

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-s4vectors

BioConductor S4 implementation of vectors and lists
dep: r-bioc-singlecellexperiment

S4 Classes for Single Cell Data
dep: r-bioc-summarizedexperiment

BioConductor assay container

sug: r-bioc-biocfilecache

GNU R management of files across sessions
sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-testthat

GNU R testsuite

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