[ Source: eigensoft ]
Package: eigensoft (7.2.1+dfsg-2)
Links for eigensoft
Debian Resources:
Download Source Package eigensoft:
- [eigensoft_7.2.1+dfsg-2.dsc]
- [eigensoft_7.2.1+dfsg.orig.tar.xz]
- [eigensoft_7.2.1+dfsg-2.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [www.hsph.harvard.edu]
Similar packages:
reduction of population bias for genetic analyses
The EIGENSOFT package combines functionality from the group's population genetics methods (Patterson et al. 2006) and their EIGENSTRAT stratification method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker's variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes.
Other Packages Related to eigensoft
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- or libblas.so.3
- virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgsl25 (>= 2.6)
- GNU Scientific Library (GSL) -- library package
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- or liblapack.so.3
- virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: liblapacke (>= 3.9.0)
- Library of linear algebra routines 3 - C lib shared version
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- rec: gnuplot
- Command-line driven interactive plotting program.
also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11
Download eigensoft
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 353.3 kB | 2,751.0 kB | [list of files] |
| arm64 | 323.6 kB | 2,783.0 kB | [list of files] |
| armel | 278.3 kB | 2,754.0 kB | [list of files] |
| armhf | 269.9 kB | 1,950.0 kB | [list of files] |
| i386 | 369.0 kB | 2,780.0 kB | [list of files] |
| mips64el | 358.3 kB | 3,593.0 kB | [list of files] |
| mipsel | 346.6 kB | 3,382.0 kB | [list of files] |
| ppc64el | 363.7 kB | 3,843.0 kB | [list of files] |
| s390x | 317.8 kB | 3,055.0 kB | [list of files] |