[ Source: r-bioc-variantannotation ]
Package: r-bioc-variantannotation (1.44.1-1)
Links for r-bioc-variantannotation
Debian Resources:
Download Source Package r-bioc-variantannotation:
- [r-bioc-variantannotation_1.44.1-1.dsc]
- [r-bioc-variantannotation_1.44.1.orig.tar.gz]
- [r-bioc-variantannotation_1.44.1-1.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
BioConductor annotation of genetic variants
This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.
Other Packages Related to r-bioc-variantannotation
|
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libcurl4 (>= 7.18.0)
- easy-to-use client-side URL transfer library (OpenSSL flavour)
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-api-bioc-3.16
- virtual package provided by r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.2.2.20221110-2)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-annotationdbi (>= 1.27.9)
- GNU R Annotation Database Interface for BioConductor
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.37.0)
- generic functions for Bioconductor
-
- dep: r-bioc-biostrings (>= 2.57.2)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-bsgenome (>= 1.47.3)
- BioConductor infrastructure for Biostrings-based genome data packages
-
- dep: r-bioc-genomeinfodb (>= 1.15.2)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicfeatures (>= 1.31.3)
- GNU R tools for making and manipulating transcript centric annotations
-
- dep: r-bioc-genomicranges (>= 1.41.5)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.23.9)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-matrixgenerics
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
-
- dep: r-bioc-rhtslib (>= 1.99.3)
- HTSlib high-throughput sequencing library as GNU R package
-
- dep: r-bioc-rsamtools (>= 1.99.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-rtracklayer (>= 1.39.7)
- GNU R interface to genome browsers and their annotation tracks
-
- dep: r-bioc-s4vectors (>= 0.27.12)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.19.5)
- BioConductor assay container
-
- dep: r-bioc-xvector (>= 0.29.2)
- BioConductor representation and manpulation of external sequences
-
- dep: r-bioc-zlibbioc
- (Virtual) zlibbioc Bioconductor package
-
- dep: r-cran-dbi
- GNU R package providing a generic database interface
-
- sug: r-bioc-annotationhub
- GNU R client to access AnnotationHub resources
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-snpstats
- BioConductor SnpMatrix and XSnpMatrix classes and methods
-
- sug: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- sug: r-cran-runit
- GNU R package providing unit testing framework
Download r-bioc-variantannotation
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 3,557.0 kB | 5,104.0 kB | [list of files] |
| arm64 | 3,535.0 kB | 5,108.0 kB | [list of files] |
| armel | 3,514.1 kB | 5,026.0 kB | [list of files] |
| armhf | 3,516.7 kB | 4,818.0 kB | [list of files] |
| i386 | 3,596.2 kB | 5,206.0 kB | [list of files] |
| mips64el | 3,537.4 kB | 5,274.0 kB | [list of files] |
| mipsel | 3,549.4 kB | 5,206.0 kB | [list of files] |
| ppc64el | 3,592.2 kB | 5,364.0 kB | [list of files] |
| s390x | 3,536.8 kB | 5,168.0 kB | [list of files] |