Пакет: theseus (3.3.0-8)

Връзки за theseus

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Външни препратки:

Начална страница [www.theseus3d.org]

Подобни пакети:

superimpose macromolecules using maximum likelihood

Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments.

When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data.

Етикети: Biology: Proteins, Field: Biology, field::biology:bioinformatics, field::biology:structural, Implemented in: C, User Interface: interface::commandline, role::program, Purpose: Analysing, use::comparing, works-with-format::plaintext

Други пакети, свързани с theseus

зависимости

препоръчани

предложени

enhances

dep: clustalo

General purpose multiple sequence alignment program for proteins
dep: libc6 (>= 2.17)

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
dep: libgsl23 (>= 2.5)

GNU Scientific Library (GSL) -- library package
dep: libgslcblas0 (>= 2.4)

GNU Scientific Library (GSL) -- blas library package
dep: muscle

Multiple alignment program of protein sequences

sug: clustalw

global multiple nucleotide or peptide sequence alignment
sug: dialign

Segment-based multiple sequence alignment
sug: kalign

Global and progressive multiple sequence alignment
sug: mafft

Multiple alignment program for amino acid or nucleotide sequences
sug: probcons

PROBabilistic CONSistency-based multiple sequence alignment
sug: t-coffee

Multiple Sequence Alignment
sug: theseus-examples

superimpose macromolecules using maximum likelihood (examples)

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Архитектура	Големина на пакета	Големина след инсталиране	Файлове
arm64	340,2 кБ	807,0 кБ	[списък на файловете]